Project: 2605 (Run 16, Clone 357,Gen 22)
Posted: Sun Jan 27, 2008 12:50 pm
Hi,
I can't seem to get this working - it shutsdown before it even starts..
I've tried restarting it 3 times. Then I wiped all the files and reinstalled. But the same thing happened with a different variant of p2605 (15,160,48).
Any help appreciated...
[11:54:15] + Processing work unit
[11:54:15] Core required: FahCore_a1.exe
[11:54:15] Core found.
[11:54:15] Working on Unit 01 [January 27 11:54:15]
[11:54:15] + Working ...
[11:54:15] - Calling './mpiexec -np 4 -host 127.0.0.1 ./FahCore_a1.exe -dir work / -suffix 01 -checkpoint 30 -forceasm -verbose -lifeline 10159 -version 600'
[11:54:15]
[11:54:15] *------------------------------*
[11:54:15] Folding@Home Gromacs SMP Core
[11:54:15] Version 1.74 (November 27, 2006)
[11:54:15]
[11:54:15] Preparing to commence simulation
[11:54:15] - Ensuring status. Please wait.
[11:54:16]
[11:54:16] Project: 2605 (Run 16, Clone 357, Gen 22)
[11:54:16]
[11:54:16] Assembly optimizations on if available.
[11:54:16] Entering M.D.
[11:54:33] on if available.
[11:54:33] Entering M.D.
NNODES=4, MYRANK=0, HOSTNAME=Cassidy-Kubuntu
NNODES=4, MYRANK=3, HOSTNAME=Cassidy-Kubuntu
NNODES=4, MYRANK=2, HOSTNAME=Cassidy-Kubuntu
NNODES=4, MYRANK=1, HOSTNAME=Cassidy-Kubuntu
NODEID=1 argc=15
NODEID=0 argc=15
NODEID=3 argc=15
NODEID=2 argc=15
Written by David van der Spoel, Erik Lindahl, Berk Hess, and others.
Copyright (c) 1991-2000, University of Groningen, The Netherlands.
Copyright (c) 2001-2004, The GROMACS development team,
check out http://www.gromacs.org for more information.
This inclusion of Gromacs code in the Folding@Home Core is under
a special license (see http://folding.stanford.edu/gromacs.html)
specially granted to Stanford by the copyright holders. If you
are interested in using Gromacs, visit http://www.gromacs.org where
you can download a free version of Gromacs under
the terms of the GNU General Public License (GPL) as published
by the Free Software Foundation; either version 2 of the License,
or (at your option) any later version.
(single precision)
starting mdrun 'Protein in POPC'
500000 steps, 1000.0 ps.
[11:54:39] Protein: Protein in POPC
[11:54:39] Writing local filProExtra SSE boost OK.
[11:54:39] C
[11:54:39] Writing local files
[11:54:39] Extra SSE boost OK.
[11:54:40] Writing local files
[11:54:40] Completed 0 out of 500000 steps (0 percent)
[11:55:48]
[11:55:48] Folding@home Core Shutdown: INTERRUPTED
[cli_3]: aborting job:
Fatal error in MPI_Sendrecv: Error message texts are not available
[0]0:Return code = 102
[0]1:Return code = 0, signaled with Segmentation fault
[0]2:Return code = 0, signaled with Quit
[0]3:Return code = 1
[11:55:53] CoreStatus = 66 (102)
[11:55:53] + Shutdown requested by user. Exiting.***** Got a SIGTERM signal (15)
[11:55:53] Killing all core threads
Folding@Home Client Shutdown.
I can't seem to get this working - it shutsdown before it even starts..
I've tried restarting it 3 times. Then I wiped all the files and reinstalled. But the same thing happened with a different variant of p2605 (15,160,48).
Any help appreciated...
[11:54:15] + Processing work unit
[11:54:15] Core required: FahCore_a1.exe
[11:54:15] Core found.
[11:54:15] Working on Unit 01 [January 27 11:54:15]
[11:54:15] + Working ...
[11:54:15] - Calling './mpiexec -np 4 -host 127.0.0.1 ./FahCore_a1.exe -dir work / -suffix 01 -checkpoint 30 -forceasm -verbose -lifeline 10159 -version 600'
[11:54:15]
[11:54:15] *------------------------------*
[11:54:15] Folding@Home Gromacs SMP Core
[11:54:15] Version 1.74 (November 27, 2006)
[11:54:15]
[11:54:15] Preparing to commence simulation
[11:54:15] - Ensuring status. Please wait.
[11:54:16]
[11:54:16] Project: 2605 (Run 16, Clone 357, Gen 22)
[11:54:16]
[11:54:16] Assembly optimizations on if available.
[11:54:16] Entering M.D.
[11:54:33] on if available.
[11:54:33] Entering M.D.
NNODES=4, MYRANK=0, HOSTNAME=Cassidy-Kubuntu
NNODES=4, MYRANK=3, HOSTNAME=Cassidy-Kubuntu
NNODES=4, MYRANK=2, HOSTNAME=Cassidy-Kubuntu
NNODES=4, MYRANK=1, HOSTNAME=Cassidy-Kubuntu
NODEID=1 argc=15
NODEID=0 argc=15
NODEID=3 argc=15
NODEID=2 argc=15
Written by David van der Spoel, Erik Lindahl, Berk Hess, and others.
Copyright (c) 1991-2000, University of Groningen, The Netherlands.
Copyright (c) 2001-2004, The GROMACS development team,
check out http://www.gromacs.org for more information.
This inclusion of Gromacs code in the Folding@Home Core is under
a special license (see http://folding.stanford.edu/gromacs.html)
specially granted to Stanford by the copyright holders. If you
are interested in using Gromacs, visit http://www.gromacs.org where
you can download a free version of Gromacs under
the terms of the GNU General Public License (GPL) as published
by the Free Software Foundation; either version 2 of the License,
or (at your option) any later version.
(single precision)
starting mdrun 'Protein in POPC'
500000 steps, 1000.0 ps.
[11:54:39] Protein: Protein in POPC
[11:54:39] Writing local filProExtra SSE boost OK.
[11:54:39] C
[11:54:39] Writing local files
[11:54:39] Extra SSE boost OK.
[11:54:40] Writing local files
[11:54:40] Completed 0 out of 500000 steps (0 percent)
[11:55:48]
[11:55:48] Folding@home Core Shutdown: INTERRUPTED
[cli_3]: aborting job:
Fatal error in MPI_Sendrecv: Error message texts are not available
[0]0:Return code = 102
[0]1:Return code = 0, signaled with Segmentation fault
[0]2:Return code = 0, signaled with Quit
[0]3:Return code = 1
[11:55:53] CoreStatus = 66 (102)
[11:55:53] + Shutdown requested by user. Exiting.***** Got a SIGTERM signal (15)
[11:55:53] Killing all core threads
Folding@Home Client Shutdown.