Page 1 of 1
Project: 2665 (Run 2, Clone 4, Gen 44)
Posted: Tue Aug 26, 2008 3:04 am
by 3dski
Code: Select all
[20:04:16] - User name: 3dski (Team 57391)
[20:04:16] - User ID: 70B6EC991DCFB221
[20:04:16] - Machine ID: 1
[14:56:55] Project: 2665 (Run 2, Clone 4, Gen 44)
[14:56:55]
[14:56:56] Entering M.D.
[14:57:03] Rejecting checkpoint
[14:57:05] Protein: HGG with glycosylations
[14:57:05] Writing local files
[14:57:14] Extra SSE boost OK.
[14:57:15] Writing local files
[14:57:15] Completed 0 out of 250000 steps (0 percent)
[15:17:51] Writing local files
[15:17:52] Completed 2500 out of 250000 steps (1 percent)
[15:38:25] Writing local files
[15:38:25] Completed 5000 out of 250000 steps (2 percent)
[15:58:56] Writing local files
[15:58:56] Completed 7500 out of 250000 steps (3 percent)
[16:19:30] Writing local files
[16:19:30] Completed 10000 out of 250000 steps (4 percent)
[16:40:03] Writing local files
[16:40:03] Completed 12500 out of 250000 steps (5 percent)
[17:00:29] Writing local files
[17:00:30] Completed 15000 out of 250000 steps (6 percent)
[17:20:34] Writing local files
[17:20:35] Completed 17500 out of 250000 steps (7 percent)
[17:40:16] Writing local files
[17:40:16] Completed 20000 out of 250000 steps (8 percent)
[18:00:00] Writing local files
[18:00:00] Completed 22500 out of 250000 steps (9 percent)
[18:19:45] Writing local files
[18:19:45] Completed 25000 out of 250000 steps (10 percent)
[18:40:02] Writing local files
[18:40:02] Completed 27500 out of 250000 steps (11 percent)
[19:00:42] Writing local files
[19:00:43] Completed 30000 out of 250000 steps (12 percent)
[19:21:19] Writing local files
[19:21:19] Completed 32500 out of 250000 steps (13 percent)
[19:42:00] Writing local files
[19:42:00] Completed 35000 out of 250000 steps (14 percent)
[20:02:34] Writing local files
[20:02:34] Completed 37500 out of 250000 steps (15 percent)
[20:23:05] Writing local files
[20:23:05] Completed 40000 out of 250000 steps (16 percent)
[20:43:36] Writing local files
[20:43:36] Completed 42500 out of 250000 steps (17 percent)
[21:04:09] Writing local files
[21:04:09] Completed 45000 out of 250000 steps (18 percent)
[21:24:43] Writing local files
[21:24:43] Completed 47500 out of 250000 steps (19 percent)
[21:45:18] Writing local files
[21:45:19] Completed 50000 out of 250000 steps (20 percent)
[22:05:53] Writing local files
[22:05:54] Completed 52500 out of 250000 steps (21 percent)
[22:26:28] Writing local files
[22:26:29] Completed 55000 out of 250000 steps (22 percent)
[22:47:02] Writing local files
[22:47:02] Completed 57500 out of 250000 steps (23 percent)
[23:07:34] Writing local files
[23:07:34] Completed 60000 out of 250000 steps (24 percent)
[23:28:22] Writing local files
[23:28:22] Completed 62500 out of 250000 steps (25 percent)
[23:49:10] Writing local files
[23:49:10] Completed 65000 out of 250000 steps (26 percent)
[00:09:58] Writing local files
[00:09:59] Completed 67500 out of 250000 steps (27 percent)
[00:30:47] Writing local files
[00:30:47] Completed 70000 out of 250000 steps (28 percent)
[00:51:35] Writing local files
[00:51:35] Completed 72500 out of 250000 steps (29 percent)
[01:12:25] Writing local files
[01:12:26] Completed 75000 out of 250000 steps (30 percent)
[01:33:15] Writing local files
[01:33:15] Completed 77500 out of 250000 steps (31 percent)
[01:54:04] Writing local files
[01:54:05] Completed 80000 out of 250000 steps (32 percent)
[02:14:42] Writing local files
[02:14:43] Completed 82500 out of 250000 steps (33 percent)
[02:35:05] Writing local files
[02:35:05] Completed 85000 out of 250000 steps (34 percent)
[02:55:30] Writing local files
[02:55:30] Completed 87500 out of 250000 steps (35 percent)
[03:15:55] Writing local files
[03:15:55] Completed 90000 out of 250000 steps (36 percent)
[03:36:17] Writing local files
[03:36:17] Completed 92500 out of 250000 steps (37 percent)
[03:56:42] Writing local files
[03:56:42] Completed 95000 out of 250000 steps (38 percent)
[04:17:05] Writing local files
[04:17:05] Completed 97500 out of 250000 steps (39 percent)
[04:37:28] Writing local files
[04:37:28] Completed 100000 out of 250000 steps (40 percent)
[04:57:52] Writing local files
[04:57:52] Completed 102500 out of 250000 steps (41 percent)
[05:18:15] Writing local files
[05:18:15] Completed 105000 out of 250000 steps (42 percent)
[05:39:42] Writing local files
[05:39:42] Completed 107500 out of 250000 steps (43 percent)
[06:01:47] Writing local files
[06:01:47] Completed 110000 out of 250000 steps (44 percent)
[06:23:49] Writing local files
[06:23:49] Completed 112500 out of 250000 steps (45 percent)
[06:46:03] Writing local files
[06:46:03] Completed 115000 out of 250000 steps (46 percent)
[07:08:06] Writing local files
[07:08:06] Completed 117500 out of 250000 steps (47 percent)
[07:30:09] Writing local files
[07:30:09] Completed 120000 out of 250000 steps (48 percent)
[07:52:13] Writing local files
[07:52:13] Completed 122500 out of 250000 steps (49 percent)
[08:14:16] Writing local files
[08:14:16] Completed 125000 out of 250000 steps (50 percent)
[08:36:08] Writing local files
[08:36:08] Completed 127500 out of 250000 steps (51 percent)
[08:56:32] Writing local files
[08:56:33] Completed 130000 out of 250000 steps (52 percent)
[09:16:58] Writing local files
[09:16:58] Completed 132500 out of 250000 steps (53 percent)
[09:37:21] Writing local files
[09:37:22] Completed 135000 out of 250000 steps (54 percent)
[09:57:45] Writing local files
[09:57:45] Completed 137500 out of 250000 steps (55 percent)
[10:18:41] Writing local files
[10:18:41] Completed 140000 out of 250000 steps (56 percent)
[10:40:39] Writing local files
[10:40:39] Completed 142500 out of 250000 steps (57 percent)
[11:02:39] Writing local files
[11:02:39] Completed 145000 out of 250000 steps (58 percent)
[11:24:41] Writing local files
[11:24:41] Completed 147500 out of 250000 steps (59 percent)
[11:46:42] Writing local files
[11:46:43] Completed 150000 out of 250000 steps (60 percent)
[12:08:47] Writing local files
[12:08:48] Completed 152500 out of 250000 steps (61 percent)
[12:30:40] Writing local files
[12:30:41] Completed 155000 out of 250000 steps (62 percent)
[12:52:23] Writing local files
[12:52:24] Completed 157500 out of 250000 steps (63 percent)
[13:14:07] Writing local files
[13:14:08] Completed 160000 out of 250000 steps (64 percent)
[13:35:51] Writing local files
[13:35:52] Completed 162500 out of 250000 steps (65 percent)
[13:57:36] Writing local files
[13:57:36] Completed 165000 out of 250000 steps (66 percent)
[14:19:21] Writing local files
[14:19:21] Completed 167500 out of 250000 steps (67 percent)
[14:41:03] Writing local files
[14:41:03] Completed 170000 out of 250000 steps (68 percent)
[15:02:49] Writing local files
[15:02:49] Completed 172500 out of 250000 steps (69 percent)
[15:24:33] Writing local files
[15:24:33] Completed 175000 out of 250000 steps (70 percent)
[15:46:18] Writing local files
[15:46:18] Completed 177500 out of 250000 steps (71 percent)
[16:08:03] Writing local files
[16:08:03] Completed 180000 out of 250000 steps (72 percent)
[16:29:49] Writing local files
[16:29:49] Completed 182500 out of 250000 steps (73 percent)
[16:51:34] Writing local files
[16:51:35] Completed 185000 out of 250000 steps (74 percent)
[17:13:17] Writing local files
[17:13:17] Completed 187500 out of 250000 steps (75 percent)
[17:35:02] Writing local files
[17:35:03] Completed 190000 out of 250000 steps (76 percent)
[17:56:46] Writing local files
[17:56:47] Completed 192500 out of 250000 steps (77 percent)
[18:18:31] Writing local files
[18:18:31] Completed 195000 out of 250000 steps (78 percent)
[18:40:31] Writing local files
[18:40:31] Completed 197500 out of 250000 steps (79 percent)
[19:02:23] Writing local files
[19:02:23] Completed 200000 out of 250000 steps (80 percent)
[19:24:00] Writing local files
[19:24:01] Completed 202500 out of 250000 steps (81 percent)
[19:45:40] Writing local files
[19:45:40] Completed 205000 out of 250000 steps (82 percent)
[20:07:21] Writing local files
[20:07:21] Completed 207500 out of 250000 steps (83 percent)
[20:28:58] Writing local files
[20:28:58] Completed 210000 out of 250000 steps (84 percent)
[20:50:35] Writing local files
[20:50:35] Completed 212500 out of 250000 steps (85 percent)
[21:12:15] Writing local files
[21:12:15] Completed 215000 out of 250000 steps (86 percent)
[21:33:56] Writing local files
[21:33:57] Completed 217500 out of 250000 steps (87 percent)
[21:55:35] Writing local files
[21:55:35] Completed 220000 out of 250000 steps (88 percent)
[22:17:14] Writing local files
[22:17:14] Completed 222500 out of 250000 steps (89 percent)
[22:39:05] Writing local files
[22:39:05] Completed 225000 out of 250000 steps (90 percent)
[23:01:02] Writing local files
[23:01:02] Completed 227500 out of 250000 steps (91 percent)
[23:22:46] Writing local files
[23:22:46] Completed 230000 out of 250000 steps (92 percent)
[23:44:30] Writing local files
[23:44:31] Completed 232500 out of 250000 steps (93 percent)
[00:06:43] Writing local files
[00:06:43] Completed 235000 out of 250000 steps (94 percent)
[00:28:51] Writing local files
[00:28:52] Completed 237500 out of 250000 steps (95 percent)
[00:51:23] Writing local files
[00:51:24] Completed 240000 out of 250000 steps (96 percent)
[01:13:32] Writing local files
[01:13:32] Completed 242500 out of 250000 steps (97 percent)
[01:34:31] Writing local files
[01:34:32] Completed 245000 out of 250000 steps (98 percent)
[01:55:31] Writing local files
[01:55:31] Completed 247500 out of 250000 steps (99 percent)
[02:16:36] Writing local files
[02:16:37] Completed 250000 out of 250000 steps (100 percent)
[02:16:37] Writing final coordinates.
[02:16:38] Past main M.D. loop
[02:16:38] Will end MPI now
[02:17:38]
[02:17:38] Finished Work Unit:
[02:17:38] - Reading up to 21421872 from "work/wudata_00.arc": Read 21421872
[02:17:38] - Reading up to 591768 from "work/wudata_00.xtc": Read 591768
[02:17:38] goefile size: 0
[02:17:38] logfile size: 203293
[02:17:38] Leaving Run
[02:17:42] - Writing 22223305 bytes of core data to disk...
[02:17:43] ... Done.
[02:17:43] - Failed to delete work/wudata_00.sas
[02:17:43] - Failed to delete work/wudata_00.goe
[02:17:43] Warning: check for stray files
[02:17:43] - Shutting down core
[02:19:43]
[02:19:43] Folding@home Core Shutdown: FINISHED_UNIT
[02:19:43]
[02:19:43] Folding@home Core Shutdown: FINISHED_UNIT
[02:19:46] CoreStatus = 7B (123)
[02:19:46] Client-core communications error: ERROR 0x7b
[02:19:46] This is a sign of more serious problems, shutting down.
I know this error has been reported but wading through the posts I cannot seem to find an answer that works. QFix didn't work. Q6600 stock clocked on XP SP3. I have the wuresults_00.dat file. I have also upgraded to the latest "drop in" .exe. Am I S.O.L. on this work unit as far as submitting it and gaining credit?
Re: Project: 2665 (Run 2, Clone 4, Gen 44)
Posted: Tue Aug 26, 2008 5:53 am
by bruce
I've never seen an error that happened in quite that sequence. I'll report it to Kasson and let him see if there's anything to be learned from it.
You may or may not be out of luck on the credit side. Please post the output from the first time you ran qfix.
So far nobody has returned that WU. The log that you posted doesn't show when that WU was downloaded (date & time) so I don't have any way to tell if you were the first assignee.
Re: Project: 2665 (Run 2, Clone 4, Gen 44)
Posted: Tue Aug 26, 2008 7:51 am
by nwkelley
i agree, seems a bit out of order... looks like bruce let peter know, so i won't bother him twice
Re: Project: 2665 (Run 2, Clone 4, Gen 44)
Posted: Tue Aug 26, 2008 10:47 am
by 3dski
Sorry I left off info you need. Here is the entire log for that work unit with more of the "header" information.
Code: Select all
[14:56:24] + Processing work unit
[14:56:24] Work type a1 not eligible for variable processors
[14:56:24] Core required: FahCore_a1.exe
[14:56:24] Core found.
[14:56:24] Using generic mpiexec calls
[14:56:24] Working on queue slot 00 [August 24 14:56:24 UTC]
[14:56:24] + Working ...
[14:56:25]
[14:56:25] *------------------------------*
[14:56:25] Folding@Home Gromacs SMP Core
[14:56:25] Version 1.74 (March 10, 2007)
[14:56:25]
[14:56:25] Preparing to commence simulation
[14:56:25] - Ensuring status. Please wait.
[14:56:30] - Starting from initial work packet
[14:56:31]
[14:56:31] Project: 2665 (Run 2, Clone 4, Gen 44)
[14:56:31]
[14:56:31] Assembly optimizations on if available.
[14:56:31] Entering M.D.
[14:56:55] tial work pa- Starting from initial work packet
[14:56:55]
[14:56:55] Project: 2665 (Run 2, Clone 4, Gen 44)
[14:56:55]
[14:56:56] Entering M.D.
[14:57:03] Rejecting checkpoint
[14:57:05] Protein: HGG with glycosylations
[14:57:05] Writing local files
[14:57:14] Extra SSE boost OK.
[14:57:15] Writing local files
[14:57:15] Completed 0 out of 250000 steps (0 percent)
[15:17:51] Writing local files
[15:17:52] Completed 2500 out of 250000 steps (1 percent)
[15:38:25] Writing local files
[15:38:25] Completed 5000 out of 250000 steps (2 percent)
[15:58:56] Writing local files
[15:58:56] Completed 7500 out of 250000 steps (3 percent)
[16:19:30] Writing local files
[16:19:30] Completed 10000 out of 250000 steps (4 percent)
[16:40:03] Writing local files
[16:40:03] Completed 12500 out of 250000 steps (5 percent)
[17:00:29] Writing local files
[17:00:30] Completed 15000 out of 250000 steps (6 percent)
[17:20:34] Writing local files
[17:20:35] Completed 17500 out of 250000 steps (7 percent)
[17:40:16] Writing local files
[17:40:16] Completed 20000 out of 250000 steps (8 percent)
[18:00:00] Writing local files
[18:00:00] Completed 22500 out of 250000 steps (9 percent)
[18:19:45] Writing local files
[18:19:45] Completed 25000 out of 250000 steps (10 percent)
[18:40:02] Writing local files
[18:40:02] Completed 27500 out of 250000 steps (11 percent)
[19:00:42] Writing local files
[19:00:43] Completed 30000 out of 250000 steps (12 percent)
[19:21:19] Writing local files
[19:21:19] Completed 32500 out of 250000 steps (13 percent)
[19:42:00] Writing local files
[19:42:00] Completed 35000 out of 250000 steps (14 percent)
[20:02:34] Writing local files
[20:02:34] Completed 37500 out of 250000 steps (15 percent)
[20:23:05] Writing local files
[20:23:05] Completed 40000 out of 250000 steps (16 percent)
[20:43:36] Writing local files
[20:43:36] Completed 42500 out of 250000 steps (17 percent)
[21:04:09] Writing local files
[21:04:09] Completed 45000 out of 250000 steps (18 percent)
[21:24:43] Writing local files
[21:24:43] Completed 47500 out of 250000 steps (19 percent)
[21:45:18] Writing local files
[21:45:19] Completed 50000 out of 250000 steps (20 percent)
[22:05:53] Writing local files
[22:05:54] Completed 52500 out of 250000 steps (21 percent)
[22:26:28] Writing local files
[22:26:29] Completed 55000 out of 250000 steps (22 percent)
[22:47:02] Writing local files
[22:47:02] Completed 57500 out of 250000 steps (23 percent)
[23:07:34] Writing local files
[23:07:34] Completed 60000 out of 250000 steps (24 percent)
[23:28:22] Writing local files
[23:28:22] Completed 62500 out of 250000 steps (25 percent)
[23:49:10] Writing local files
[23:49:10] Completed 65000 out of 250000 steps (26 percent)
[00:09:58] Writing local files
[00:09:59] Completed 67500 out of 250000 steps (27 percent)
[00:30:47] Writing local files
[00:30:47] Completed 70000 out of 250000 steps (28 percent)
[00:51:35] Writing local files
[00:51:35] Completed 72500 out of 250000 steps (29 percent)
[01:12:25] Writing local files
[01:12:26] Completed 75000 out of 250000 steps (30 percent)
[01:33:15] Writing local files
[01:33:15] Completed 77500 out of 250000 steps (31 percent)
[01:54:04] Writing local files
[01:54:05] Completed 80000 out of 250000 steps (32 percent)
[02:14:42] Writing local files
[02:14:43] Completed 82500 out of 250000 steps (33 percent)
[02:35:05] Writing local files
[02:35:05] Completed 85000 out of 250000 steps (34 percent)
[02:55:30] Writing local files
[02:55:30] Completed 87500 out of 250000 steps (35 percent)
[03:15:55] Writing local files
[03:15:55] Completed 90000 out of 250000 steps (36 percent)
[03:36:17] Writing local files
[03:36:17] Completed 92500 out of 250000 steps (37 percent)
[03:56:42] Writing local files
[03:56:42] Completed 95000 out of 250000 steps (38 percent)
[04:17:05] Writing local files
[04:17:05] Completed 97500 out of 250000 steps (39 percent)
[04:37:28] Writing local files
[04:37:28] Completed 100000 out of 250000 steps (40 percent)
[04:57:52] Writing local files
[04:57:52] Completed 102500 out of 250000 steps (41 percent)
[05:18:15] Writing local files
[05:18:15] Completed 105000 out of 250000 steps (42 percent)
[05:39:42] Writing local files
[05:39:42] Completed 107500 out of 250000 steps (43 percent)
[06:01:47] Writing local files
[06:01:47] Completed 110000 out of 250000 steps (44 percent)
[06:23:49] Writing local files
[06:23:49] Completed 112500 out of 250000 steps (45 percent)
[06:46:03] Writing local files
[06:46:03] Completed 115000 out of 250000 steps (46 percent)
[07:08:06] Writing local files
[07:08:06] Completed 117500 out of 250000 steps (47 percent)
[07:30:09] Writing local files
[07:30:09] Completed 120000 out of 250000 steps (48 percent)
[07:52:13] Writing local files
[07:52:13] Completed 122500 out of 250000 steps (49 percent)
[08:14:16] Writing local files
[08:14:16] Completed 125000 out of 250000 steps (50 percent)
[08:36:08] Writing local files
[08:36:08] Completed 127500 out of 250000 steps (51 percent)
[08:56:32] Writing local files
[08:56:33] Completed 130000 out of 250000 steps (52 percent)
[09:16:58] Writing local files
[09:16:58] Completed 132500 out of 250000 steps (53 percent)
[09:37:21] Writing local files
[09:37:22] Completed 135000 out of 250000 steps (54 percent)
[09:57:45] Writing local files
[09:57:45] Completed 137500 out of 250000 steps (55 percent)
[10:18:41] Writing local files
[10:18:41] Completed 140000 out of 250000 steps (56 percent)
[10:40:39] Writing local files
[10:40:39] Completed 142500 out of 250000 steps (57 percent)
[11:02:39] Writing local files
[11:02:39] Completed 145000 out of 250000 steps (58 percent)
[11:24:41] Writing local files
[11:24:41] Completed 147500 out of 250000 steps (59 percent)
[11:46:42] Writing local files
[11:46:43] Completed 150000 out of 250000 steps (60 percent)
[12:08:47] Writing local files
[12:08:48] Completed 152500 out of 250000 steps (61 percent)
[12:30:40] Writing local files
[12:30:41] Completed 155000 out of 250000 steps (62 percent)
[12:52:23] Writing local files
[12:52:24] Completed 157500 out of 250000 steps (63 percent)
[13:14:07] Writing local files
[13:14:08] Completed 160000 out of 250000 steps (64 percent)
[13:35:51] Writing local files
[13:35:52] Completed 162500 out of 250000 steps (65 percent)
[13:57:36] Writing local files
[13:57:36] Completed 165000 out of 250000 steps (66 percent)
[14:19:21] Writing local files
[14:19:21] Completed 167500 out of 250000 steps (67 percent)
[14:41:03] Writing local files
[14:41:03] Completed 170000 out of 250000 steps (68 percent)
[15:02:49] Writing local files
[15:02:49] Completed 172500 out of 250000 steps (69 percent)
[15:24:33] Writing local files
[15:24:33] Completed 175000 out of 250000 steps (70 percent)
[15:46:18] Writing local files
[15:46:18] Completed 177500 out of 250000 steps (71 percent)
[16:08:03] Writing local files
[16:08:03] Completed 180000 out of 250000 steps (72 percent)
[16:29:49] Writing local files
[16:29:49] Completed 182500 out of 250000 steps (73 percent)
[16:51:34] Writing local files
[16:51:35] Completed 185000 out of 250000 steps (74 percent)
[17:13:17] Writing local files
[17:13:17] Completed 187500 out of 250000 steps (75 percent)
[17:35:02] Writing local files
[17:35:03] Completed 190000 out of 250000 steps (76 percent)
[17:56:46] Writing local files
[17:56:47] Completed 192500 out of 250000 steps (77 percent)
[18:18:31] Writing local files
[18:18:31] Completed 195000 out of 250000 steps (78 percent)
[18:40:31] Writing local files
[18:40:31] Completed 197500 out of 250000 steps (79 percent)
[19:02:23] Writing local files
[19:02:23] Completed 200000 out of 250000 steps (80 percent)
[19:24:00] Writing local files
[19:24:01] Completed 202500 out of 250000 steps (81 percent)
[19:45:40] Writing local files
[19:45:40] Completed 205000 out of 250000 steps (82 percent)
[20:07:21] Writing local files
[20:07:21] Completed 207500 out of 250000 steps (83 percent)
[20:28:58] Writing local files
[20:28:58] Completed 210000 out of 250000 steps (84 percent)
[20:50:35] Writing local files
[20:50:35] Completed 212500 out of 250000 steps (85 percent)
[21:12:15] Writing local files
[21:12:15] Completed 215000 out of 250000 steps (86 percent)
[21:33:56] Writing local files
[21:33:57] Completed 217500 out of 250000 steps (87 percent)
[21:55:35] Writing local files
[21:55:35] Completed 220000 out of 250000 steps (88 percent)
[22:17:14] Writing local files
[22:17:14] Completed 222500 out of 250000 steps (89 percent)
[22:39:05] Writing local files
[22:39:05] Completed 225000 out of 250000 steps (90 percent)
[23:01:02] Writing local files
[23:01:02] Completed 227500 out of 250000 steps (91 percent)
[23:22:46] Writing local files
[23:22:46] Completed 230000 out of 250000 steps (92 percent)
[23:44:30] Writing local files
[23:44:31] Completed 232500 out of 250000 steps (93 percent)
[00:06:43] Writing local files
[00:06:43] Completed 235000 out of 250000 steps (94 percent)
[00:28:51] Writing local files
[00:28:52] Completed 237500 out of 250000 steps (95 percent)
[00:51:23] Writing local files
[00:51:24] Completed 240000 out of 250000 steps (96 percent)
[01:13:32] Writing local files
[01:13:32] Completed 242500 out of 250000 steps (97 percent)
[01:34:31] Writing local files
[01:34:32] Completed 245000 out of 250000 steps (98 percent)
[01:55:31] Writing local files
[01:55:31] Completed 247500 out of 250000 steps (99 percent)
[02:16:36] Writing local files
[02:16:37] Completed 250000 out of 250000 steps (100 percent)
[02:16:37] Writing final coordinates.
[02:16:38] Past main M.D. loop
[02:16:38] Will end MPI now
[02:17:38]
[02:17:38] Finished Work Unit:
[02:17:38] - Reading up to 21421872 from "work/wudata_00.arc": Read 21421872
[02:17:38] - Reading up to 591768 from "work/wudata_00.xtc": Read 591768
[02:17:38] goefile size: 0
[02:17:38] logfile size: 203293
[02:17:38] Leaving Run
[02:17:42] - Writing 22223305 bytes of core data to disk...
[02:17:43] ... Done.
[02:17:43] - Failed to delete work/wudata_00.sas
[02:17:43] - Failed to delete work/wudata_00.goe
[02:17:43] Warning: check for stray files
[02:17:43] - Shutting down core
[02:19:43]
[02:19:43] Folding@home Core Shutdown: FINISHED_UNIT
[02:19:43]
[02:19:43] Folding@home Core Shutdown: FINISHED_UNIT
[02:19:46] CoreStatus = 7B (123)
[02:19:46] Client-core communications error: ERROR 0x7b
[02:19:46] This is a sign of more serious problems, shutting down.
Since this seems to be a unique situation to you, below is a different work unit that ended with the same result. I've had this occur five times, which is why I've posted.
Code: Select all
[18:23:48] + Processing work unit
[18:23:48] Work type a1 not eligible for variable processors
[18:23:48] Core required: FahCore_a1.exe
[18:23:48] Core found.
[18:23:48] Using generic mpiexec calls
[18:23:48] Working on queue slot 07 [August 11 18:23:48 UTC]
[18:23:48] + Working ...
[18:23:48]
[18:23:48] *------------------------------*
[18:23:48] Folding@Home Gromacs SMP Core
[18:23:48] Version 1.74 (March 10, 2007)
[18:23:48]
[18:23:48] Preparing to commence simulation
[18:23:48] - Ensuring status. Please wait.
[18:23:54] - Starting from initial work packet
[18:23:54]
[18:23:54] Project: 2665 (Run 0, Clone 930, Gen 41)
[18:23:54]
[18:23:54] Assembly optimizations on if available.
[18:23:54] Entering M.D.
[18:24:16] percent)
[18:24:16] - Starting from initial work packet
[18:24:16]
[18:24:16] Project: 2665 (Run 0, Clone 930, Gen 41)
[18:24:16]
[18:24:17] Entering M.D.
[18:24:24] Rejecting checkpoint
[18:24:26] Protein: HGG in water
[18:24:26] Writing local files
[18:24:35] Extra SSE boost OK.
[18:24:36] Writing local files
[18:24:36] Completed 0 out of 250000 steps (0 percent)
[18:43:35] Writing local files
[18:43:36] Completed 2500 out of 250000 steps (1 percent)
[19:02:45] Writing local files
[19:02:45] Completed 5000 out of 250000 steps (2 percent)
[19:21:56] Writing local files
[19:21:56] Completed 7500 out of 250000 steps (3 percent)
[19:41:06] Writing local files
[19:41:07] Completed 10000 out of 250000 steps (4 percent)
[20:00:21] Writing local files
[20:00:22] Completed 12500 out of 250000 steps (5 percent)
[20:19:14] Writing local files
[20:19:15] Completed 15000 out of 250000 steps (6 percent)
[20:38:06] Writing local files
[20:38:06] Completed 17500 out of 250000 steps (7 percent)
[20:57:36] Writing local files
[20:57:36] Completed 20000 out of 250000 steps (8 percent)
[21:16:36] Writing local files
[21:16:36] Completed 22500 out of 250000 steps (9 percent)
[21:35:33] Writing local files
[21:35:34] Completed 25000 out of 250000 steps (10 percent)
[21:54:29] Writing local files
[21:54:29] Completed 27500 out of 250000 steps (11 percent)
[22:13:21] Writing local files
[22:13:21] Completed 30000 out of 250000 steps (12 percent)
[22:32:16] Writing local files
[22:32:16] Completed 32500 out of 250000 steps (13 percent)
[22:51:38] Writing local files
[22:51:39] Completed 35000 out of 250000 steps (14 percent)
[23:11:06] Writing local files
[23:11:06] Completed 37500 out of 250000 steps (15 percent)
[23:30:32] Writing local files
[23:30:32] Completed 40000 out of 250000 steps (16 percent)
[23:49:58] Writing local files
[23:49:58] Completed 42500 out of 250000 steps (17 percent)
[00:09:26] Writing local files
[00:09:26] Completed 45000 out of 250000 steps (18 percent)
[00:28:15] Writing local files
[00:28:15] Completed 47500 out of 250000 steps (19 percent)
[00:46:36] Writing local files
[00:46:36] Completed 50000 out of 250000 steps (20 percent)
[01:04:58] Writing local files
[01:04:58] Completed 52500 out of 250000 steps (21 percent)
[01:23:18] Writing local files
[01:23:19] Completed 55000 out of 250000 steps (22 percent)
[01:41:41] Writing local files
[01:41:42] Completed 57500 out of 250000 steps (23 percent)
[02:00:03] Writing local files
[02:00:03] Completed 60000 out of 250000 steps (24 percent)
[02:18:23] Writing local files
[02:18:23] Completed 62500 out of 250000 steps (25 percent)
[02:36:43] Writing local files
[02:36:43] Completed 65000 out of 250000 steps (26 percent)
[02:55:03] Writing local files
[02:55:04] Completed 67500 out of 250000 steps (27 percent)
[03:13:24] Writing local files
[03:13:24] Completed 70000 out of 250000 steps (28 percent)
[03:31:44] Writing local files
[03:31:44] Completed 72500 out of 250000 steps (29 percent)
[03:50:02] Writing local files
[03:50:02] Completed 75000 out of 250000 steps (30 percent)
[04:08:21] Writing local files
[04:08:21] Completed 77500 out of 250000 steps (31 percent)
[04:26:40] Writing local files
[04:26:41] Completed 80000 out of 250000 steps (32 percent)
[04:44:59] Writing local files
[04:45:00] Completed 82500 out of 250000 steps (33 percent)
[05:03:18] Writing local files
[05:03:18] Completed 85000 out of 250000 steps (34 percent)
[05:21:36] Writing local files
[05:21:36] Completed 87500 out of 250000 steps (35 percent)
[05:39:56] Writing local files
[05:39:56] Completed 90000 out of 250000 steps (36 percent)
[05:58:15] Writing local files
[05:58:15] Completed 92500 out of 250000 steps (37 percent)
[06:16:31] Writing local files
[06:16:31] Completed 95000 out of 250000 steps (38 percent)
[06:35:06] Writing local files
[06:35:06] Completed 97500 out of 250000 steps (39 percent)
[06:53:24] Writing local files
[06:53:24] Completed 100000 out of 250000 steps (40 percent)
[07:11:41] Writing local files
[07:11:41] Completed 102500 out of 250000 steps (41 percent)
[07:30:00] Writing local files
[07:30:00] Completed 105000 out of 250000 steps (42 percent)
[07:48:19] Writing local files
[07:48:20] Completed 107500 out of 250000 steps (43 percent)
[08:06:38] Writing local files
[08:06:38] Completed 110000 out of 250000 steps (44 percent)
[08:24:57] Writing local files
[08:24:57] Completed 112500 out of 250000 steps (45 percent)
[08:43:17] Writing local files
[08:43:17] Completed 115000 out of 250000 steps (46 percent)
[09:01:35] Writing local files
[09:01:36] Completed 117500 out of 250000 steps (47 percent)
[09:19:54] Writing local files
[09:19:54] Completed 120000 out of 250000 steps (48 percent)
[09:38:13] Writing local files
[09:38:13] Completed 122500 out of 250000 steps (49 percent)
[09:56:33] Writing local files
[09:56:33] Completed 125000 out of 250000 steps (50 percent)
[10:14:52] Writing local files
[10:14:52] Completed 127500 out of 250000 steps (51 percent)
[10:33:13] Writing local files
[10:33:13] Completed 130000 out of 250000 steps (52 percent)
[10:51:33] Writing local files
[10:51:33] Completed 132500 out of 250000 steps (53 percent)
[11:09:54] Writing local files
[11:09:54] Completed 135000 out of 250000 steps (54 percent)
[11:28:14] Writing local files
[11:28:14] Completed 137500 out of 250000 steps (55 percent)
[11:46:35] Writing local files
[11:46:35] Completed 140000 out of 250000 steps (56 percent)
[12:04:55] Writing local files
[12:04:55] Completed 142500 out of 250000 steps (57 percent)
[12:23:12] Writing local files
[12:23:12] Completed 145000 out of 250000 steps (58 percent)
[12:41:32] Writing local files
[12:41:32] Completed 147500 out of 250000 steps (59 percent)
[12:59:52] Writing local files
[12:59:53] Completed 150000 out of 250000 steps (60 percent)
[13:18:11] Writing local files
[13:18:12] Completed 152500 out of 250000 steps (61 percent)
[13:36:31] Writing local files
[13:36:31] Completed 155000 out of 250000 steps (62 percent)
[13:54:49] Writing local files
[13:54:49] Completed 157500 out of 250000 steps (63 percent)
[14:13:08] Writing local files
[14:13:08] Completed 160000 out of 250000 steps (64 percent)
[14:31:28] Writing local files
[14:31:28] Completed 162500 out of 250000 steps (65 percent)
[14:49:47] Writing local files
[14:49:47] Completed 165000 out of 250000 steps (66 percent)
[15:08:06] Writing local files
[15:08:07] Completed 167500 out of 250000 steps (67 percent)
[15:26:24] Writing local files
[15:26:24] Completed 170000 out of 250000 steps (68 percent)
[15:45:06] Writing local files
[15:45:07] Completed 172500 out of 250000 steps (69 percent)
[16:04:06] Writing local files
[16:04:06] Completed 175000 out of 250000 steps (70 percent)
[16:23:03] Writing local files
[16:23:03] Completed 177500 out of 250000 steps (71 percent)
[16:42:00] Writing local files
[16:42:00] Completed 180000 out of 250000 steps (72 percent)
[17:00:57] Writing local files
[17:00:57] Completed 182500 out of 250000 steps (73 percent)
[17:20:07] Writing local files
[17:20:07] Completed 185000 out of 250000 steps (74 percent)
[17:39:17] Writing local files
[17:39:17] Completed 187500 out of 250000 steps (75 percent)
[17:58:14] Writing local files
[17:58:14] Completed 190000 out of 250000 steps (76 percent)
[18:17:47] Writing local files
[18:17:48] Completed 192500 out of 250000 steps (77 percent)
[18:37:04] Writing local files
[18:37:04] Completed 195000 out of 250000 steps (78 percent)
[18:56:35] Writing local files
[18:56:36] Completed 197500 out of 250000 steps (79 percent)
[19:16:10] Writing local files
[19:16:10] Completed 200000 out of 250000 steps (80 percent)
[19:35:14] Writing local files
[19:35:15] Completed 202500 out of 250000 steps (81 percent)
[19:54:19] Writing local files
[19:54:19] Completed 205000 out of 250000 steps (82 percent)
[20:13:15] Writing local files
[20:13:15] Completed 207500 out of 250000 steps (83 percent)
[20:32:10] Writing local files
[20:32:10] Completed 210000 out of 250000 steps (84 percent)
[20:51:06] Writing local files
[20:51:06] Completed 212500 out of 250000 steps (85 percent)
[21:10:08] Writing local files
[21:10:08] Completed 215000 out of 250000 steps (86 percent)
[21:28:42] Writing local files
[21:28:42] Completed 217500 out of 250000 steps (87 percent)
[21:47:15] Writing local files
[21:47:15] Completed 220000 out of 250000 steps (88 percent)
[22:05:49] Writing local files
[22:05:49] Completed 222500 out of 250000 steps (89 percent)
[22:24:23] Writing local files
[22:24:23] Completed 225000 out of 250000 steps (90 percent)
[22:42:57] Writing local files
[22:42:57] Completed 227500 out of 250000 steps (91 percent)
[23:01:31] Writing local files
[23:01:31] Completed 230000 out of 250000 steps (92 percent)
[23:20:04] Writing local files
[23:20:04] Completed 232500 out of 250000 steps (93 percent)
[23:38:37] Writing local files
[23:38:37] Completed 235000 out of 250000 steps (94 percent)
[23:57:08] Writing local files
[23:57:09] Completed 237500 out of 250000 steps (95 percent)
[00:15:39] Writing local files
[00:15:40] Completed 240000 out of 250000 steps (96 percent)
[00:34:18] Writing local files
[00:34:18] Completed 242500 out of 250000 steps (97 percent)
[00:53:33] Writing local files
[00:53:33] Completed 245000 out of 250000 steps (98 percent)
[01:12:56] Writing local files
[01:12:56] Completed 247500 out of 250000 steps (99 percent)
[01:32:10] Writing local files
[01:32:11] Completed 250000 out of 250000 steps (100 percent)
[01:32:11] Writing final coordinates.
[01:32:13] Past main M.D. loop
[01:32:13] Will end MPI now
[01:33:13]
[01:33:13] Finished Work Unit:
[01:33:13] - Reading up to 21310704 from "work/wudata_07.arc": Read 21310704
[01:33:13] - Reading up to 557948 from "work/wudata_07.xtc": Read 557948
[01:33:13] goefile size: 0
[01:33:13] logfile size: 203304
[01:33:13] Leaving Run
[01:33:16] - Writing 22078328 bytes of core data to disk...
[01:33:16] ... Done.
[01:33:16] - Failed to delete work/wudata_07.sas
[01:33:16] - Failed to delete work/wudata_07.goe
[01:33:16] Warning: check for stray files
[01:33:16] - Shutting down core
[01:33:16]
[01:33:16] Folding@home Core Shutdown: FINISHED_UNIT
[01:33:16]
[01:33:16] Folding@home Core Shutdown: FINISHED_UNIT
[01:35:20] CoreStatus = 7B (123)
[01:35:20] Client-core communications error: ERROR 0x7b
[01:35:20] This is a sign of more serious problems, shutting down.
Re: Project: 2665 (Run 2, Clone 4, Gen 44)
Posted: Tue Aug 26, 2008 11:03 am
by 3dski
Output from qfix for the work unit in the title:
entry 1, status 0, address 171.64.65.64:8080
entry 2, status 0, address 171.64.65.64:8080
entry 3, status 0, address 171.64.65.64:8080
entry 4, status 0, address 171.64.65.63:8080
entry 5, status 0, address 171.64.65.64:8080
entry 6, status 0, address 171.64.65.64:8080
entry 7, status 0, address 171.64.65.64:8080
entry 8, status 0, address 171.64.65.64:8080
entry 9, status 0, address 171.64.65.63:8080
entry 0, status 1, address 171.64.65.64:8080
Found results <work\wuresults_00.dat>: proj 2665, run 2, clone 4, gen 44
-- queue entry: proj 2665, run 2, clone 4, gen 44
-- queue entry isn't empty
File is OK
Re: Project: 2665 (Run 2, Clone 4, Gen 44)
Posted: Tue Aug 26, 2008 5:13 pm
by bruce
3dski wrote:entry 0, status 1, address 171.64.65.64:8080
Found results <work\wuresults_00.dat>: proj 2665, run 2, clone 4, gen 44
-- queue entry: proj 2665, run 2, clone 4, gen 44
-- queue entry isn't empty
File is OK
This often means that the WU may have finished but the queue still says it's not ready to upload (which is consistent with what we're seeing in FAHlog). In the qfix guide, it suggests (1) Backing up everything, (2) Restart the client with
-delete 00, (3) Run qfix, (4) Restart the client normally.
Re: Project: 2665 (Run 2, Clone 4, Gen 44)
Posted: Tue Aug 26, 2008 10:48 pm
by 3dski
WOOT!
Thanks for the tip - that worked for me!
