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18435 stuck on Ready 0%

https://foldingforum.org/viewtopic.php?t=38961

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18435 stuck on Ready 0%

Posted: Fri Jan 13, 2023 11:15 pm
by Knish
uh-0h, looks like it's been stuck in this loop for over a day. 6-core CPU only in archlinux.
tried pause/unpause, and rebooting, Looks like its still stuck.
Advanced control showing TPF 55 sec but the Folding slots area is blue, stuck at "Ready" and the cpu isn't doing any calculations

Code: Select all

*********************** Log Started 2023-01-13T23:05:18Z ***********************
23:05:18:******************************* libFAH ********************************
23:05:18:       Date: Oct 20 2020
23:05:18:       Time: 20:36:39
23:05:18:   Revision: 5ca109d295a6245e2a2f590b3d0085ad5e567aeb
23:05:18:     Branch: master
23:05:18:   Compiler: GNU 8.3.0
23:05:18:    Options: -faligned-new -std=c++11 -fsigned-char -ffunction-sections
23:05:18:             -fdata-sections -O3 -funroll-loops -fno-pie
23:05:18:   Platform: linux2 5.8.0-1-amd64
23:05:18:       Bits: 64
23:05:18:       Mode: Release
23:05:18:****************************** FAHClient ******************************
23:05:18:    Version: 7.6.21
23:05:18:     Author: Joseph Coffland <[email protected]>
23:05:18:  Copyright: 2020 foldingathome.org
23:05:18:   Homepage: https://foldingathome.org/
23:05:18:       Date: Oct 20 2020
23:05:18:       Time: 20:39:00
23:05:18:   Revision: 6efbf0e138e22d3963e6a291f78dcb9c6422a278
23:05:18:     Branch: master
23:05:18:   Compiler: GNU 8.3.0
23:05:18:    Options: -faligned-new -std=c++11 -fsigned-char -ffunction-sections
23:05:18:             -fdata-sections -O3 -funroll-loops -fno-pie
23:05:18:   Platform: linux2 5.8.0-1-amd64
23:05:18:       Bits: 64
23:05:18:       Mode: Release
23:05:18:       Args: --config /etc/foldingathome/config.xml --log
23:05:18:             /var/log/foldingathome/log.txt --log-rotate-dir
23:05:18:             /var/log/foldingathome
23:05:18:     Config: /etc/foldingathome/config.xml
23:05:18:******************************** CBang ********************************
23:05:18:       Date: Oct 20 2020
23:05:18:       Time: 18:37:59
23:05:18:   Revision: 7e4ce85225d7eaeb775e87c31740181ca603de60
23:05:18:     Branch: master
23:05:18:   Compiler: GNU 8.3.0
23:05:18:    Options: -faligned-new -std=c++11 -fsigned-char -ffunction-sections
23:05:18:             -fdata-sections -O3 -funroll-loops -fno-pie -fPIC
23:05:18:   Platform: linux2 5.8.0-1-amd64
23:05:18:       Bits: 64
23:05:18:       Mode: Release
23:05:18:******************************* System ********************************
23:05:18:        CPU: Intel(R) Core(TM) i5-8400 CPU @ 2.80GHz
23:05:18:     CPU ID: GenuineIntel Family 6 Model 158 Stepping 10
23:05:18:       CPUs: 6
23:05:18:     Memory: 3.70GiB
23:05:18:Free Memory: 3.44GiB
23:05:18:    Threads: POSIX_THREADS
23:05:18: OS Version: 5.19
23:05:18:Has Battery: false
23:05:18: On Battery: false
23:05:18: UTC Offset: -8
23:05:18:        PID: 367
23:05:18:        CWD: /var/lib/private/fah
23:05:18:         OS: Linux 5.19.13-arch1-1 x86_64
23:05:18:    OS Arch: AMD64
23:05:18:       GPUs: 0
23:05:18:       CUDA: Not detected: Failed to open dynamic library 'libcuda.so':
23:05:18:             libcuda.so: cannot open shared object file: No such file or
23:05:18:             directory
23:05:18:     OpenCL: Not detected: Failed to open dynamic library 'libOpenCL.so':
23:05:18:             libOpenCL.so: cannot open shared object file: No such file or
23:05:18:             directory
23:05:18:***********************************************************************
23:05:18:<config>
23:05:18:  <!-- Folding Slot Configuration -->
23:05:18:  <cause v='PARKINSONS'/>
23:05:18:  <gpu v='false'/>
23:05:18:

23:05:18:  <!-- Work Unit Control -->
23:05:18:  <next-unit-percentage v='100'/>
23:05:18:
23:05:18:  <!-- Folding Slots -->
23:05:18:  <slot id='0' type='CPU'>
23:05:18:    <paused v='true'/>
23:05:18:  </slot>
23:05:18:</config>
23:05:18:Trying to access database...
23:05:18:Successfully acquired database lock
23:05:18:FS00:Initialized folding slot 00: cpu:6
23:05:56:FS00:Unpaused
23:05:56:WU01:FS00:Starting
23:05:56:WU01:FS00:Removing old file 'work/01/logfile_01-20230113-223134.txt'
23:05:56:WU01:FS00:Running FahCore: /usr/bin/FAHCoreWrapper /var/lib/private/fah/cores/cores.foldingathome.org/lin/64bit-avx2-256/a8-0.0.12/Core_a8.fah/FahCore_a8 -dir 01 -suffix 01 -version 706 -lifeline 367 -checkpoint 15 -np 6
23:05:56:WU01:FS00:Started FahCore on PID 424
23:05:56:WU01:FS00:Core PID:428
23:05:56:WU01:FS00:FahCore 0xa8 started
23:05:57:WU01:FS00:0xa8:*********************** Log Started 2023-01-13T23:05:57Z ***********************
23:05:57:WU01:FS00:0xa8:************************** Gromacs Folding@home Core ***************************
23:05:57:WU01:FS00:0xa8:       Core: Gromacs
23:05:57:WU01:FS00:0xa8:       Type: 0xa8
23:05:57:WU01:FS00:0xa8:    Version: 0.0.12
23:05:57:WU01:FS00:0xa8:     Author: Joseph Coffland <[email protected]>
23:05:57:WU01:FS00:0xa8:  Copyright: 2020 foldingathome.org
23:05:57:WU01:FS00:0xa8:   Homepage: https://foldingathome.org/
23:05:57:WU01:FS00:0xa8:       Date: Jan 16 2021
23:05:57:WU01:FS00:0xa8:       Time: 19:24:44
23:05:57:WU01:FS00:0xa8:   Compiler: GNU 8.3.0
23:05:57:WU01:FS00:0xa8:    Options: -faligned-new -std=c++14 -fsigned-char -ffunction-sections
23:05:57:WU01:FS00:0xa8:             -fdata-sections -O3 -funroll-loops -fno-pie
23:05:57:WU01:FS00:0xa8:   Platform: linux2 4.15.0-128-generic
23:05:57:WU01:FS00:0xa8:       Bits: 64
23:05:57:WU01:FS00:0xa8:       Mode: Release
23:05:57:WU01:FS00:0xa8:       SIMD: avx2_256
23:05:57:WU01:FS00:0xa8:     OpenMP: ON
23:05:57:WU01:FS00:0xa8:       CUDA: OFF
23:05:57:WU01:FS00:0xa8:       Args: -dir 01 -suffix 01 -version 706 -lifeline 424 -checkpoint 15 -np 6
23:05:57:WU01:FS00:0xa8:************************************ libFAH ************************************
23:05:57:WU01:FS00:0xa8:       Date: Jan 16 2021
23:05:57:WU01:FS00:0xa8:       Time: 19:21:38
23:05:57:WU01:FS00:0xa8:   Compiler: GNU 8.3.0
23:05:57:WU01:FS00:0xa8:    Options: -faligned-new -std=c++14 -fsigned-char -ffunction-sections
23:05:57:WU01:FS00:0xa8:             -fdata-sections -O3 -funroll-loops -fno-pie
23:05:57:WU01:FS00:0xa8:   Platform: linux2 4.15.0-128-generic
23:05:57:WU01:FS00:0xa8:       Bits: 64
23:05:57:WU01:FS00:0xa8:       Mode: Release
23:05:57:WU01:FS00:0xa8:************************************ CBang *************************************
23:05:57:WU01:FS00:0xa8:       Date: Jan 16 2021
23:05:57:WU01:FS00:0xa8:       Time: 19:21:24
23:05:57:WU01:FS00:0xa8:   Compiler: GNU 8.3.0
23:05:57:WU01:FS00:0xa8:    Options: -faligned-new -std=c++14 -fsigned-char -ffunction-sections
23:05:57:WU01:FS00:0xa8:             -fdata-sections -O3 -funroll-loops -fno-pie -fPIC
23:05:57:WU01:FS00:0xa8:   Platform: linux2 4.15.0-128-generic
23:05:57:WU01:FS00:0xa8:       Bits: 64
23:05:57:WU01:FS00:0xa8:       Mode: Release
23:05:57:WU01:FS00:0xa8:************************************ System ************************************
23:05:57:WU01:FS00:0xa8:        CPU: Intel(R) Core(TM) i5-8400 CPU @ 2.80GHz
23:05:57:WU01:FS00:0xa8:     CPU ID: GenuineIntel Family 6 Model 158 Stepping 10
23:05:57:WU01:FS00:0xa8:       CPUs: 6
23:05:57:WU01:FS00:0xa8:     Memory: 3.70GiB
23:05:57:WU01:FS00:0xa8:Free Memory: 3.44GiB
23:05:57:WU01:FS00:0xa8:    Threads: POSIX_THREADS
23:05:57:WU01:FS00:0xa8: OS Version: 5.19
23:05:57:WU01:FS00:0xa8:Has Battery: false
23:05:57:WU01:FS00:0xa8: On Battery: false
23:05:57:WU01:FS00:0xa8: UTC Offset: -8
23:05:57:WU01:FS00:0xa8:        PID: 428
23:05:57:WU01:FS00:0xa8:        CWD: /var/lib/private/fah/work
23:05:57:WU01:FS00:0xa8:********************************************************************************
23:05:57:WU01:FS00:0xa8:Project: 18435 (Run 29, Clone 11, Gen 0)
23:05:57:WU01:FS00:0xa8:Unit: 0x00000000000000000000000000000000
23:05:57:WU01:FS00:0xa8:Digital signatures verified
23:05:57:WU01:FS00:0xa8:Calling: mdrun -c frame0.gro -s frame0.tpr -x frame0.xtc -cpt 15 -nt 6 -ntmpi 1
23:05:57:WU01:FS00:0xa8:Steps: first=0 total=5000000
23:05:59:WU01:FS00:0xa8:Completed 1 out of 5000000 steps (0%)
23:06:02:WU01:FS00:FahCore returned: INTERRUPTED (102 = 0x66)
23:06:02:WU01:FS00:Starting
23:06:02:WU01:FS00:Removing old file 'work/01/logfile_01-20230113-223234.txt'
23:06:02:WU01:FS00:Running FahCore: /usr/bin/FAHCoreWrapper /var/lib/private/fah/cores/cores.foldingathome.org/lin/64bit-avx2-256/a8-0.0.12/Core_a8.fah/FahCore_a8 -dir 01 -suffix 01 -version 706 -lifeline 367 -checkpoint 15 -np 6
23:06:02:WU01:FS00:Started FahCore on PID 447
23:06:02:WU01:FS00:Core PID:451
23:06:02:WU01:FS00:FahCore 0xa8 started
23:06:03:WU01:FS00:0xa8:*********************** Log Started 2023-01-13T23:06:02Z ***********************
23:06:03:WU01:FS00:0xa8:************************** Gromacs Folding@home Core ***************************
23:06:03:WU01:FS00:0xa8:       Core: Gromacs
23:06:03:WU01:FS00:0xa8:       Type: 0xa8
23:06:03:WU01:FS00:0xa8:    Version: 0.0.12
23:06:03:WU01:FS00:0xa8:     Author: Joseph Coffland <[email protected]>
23:06:03:WU01:FS00:0xa8:  Copyright: 2020 foldingathome.org
23:06:03:WU01:FS00:0xa8:   Homepage: https://foldingathome.org/
23:06:03:WU01:FS00:0xa8:       Date: Jan 16 2021
23:06:03:WU01:FS00:0xa8:       Time: 19:24:44
23:06:03:WU01:FS00:0xa8:   Compiler: GNU 8.3.0
23:06:03:WU01:FS00:0xa8:    Options: -faligned-new -std=c++14 -fsigned-char -ffunction-sections
23:06:03:WU01:FS00:0xa8:             -fdata-sections -O3 -funroll-loops -fno-pie
23:06:03:WU01:FS00:0xa8:   Platform: linux2 4.15.0-128-generic
23:06:03:WU01:FS00:0xa8:       Bits: 64
23:06:03:WU01:FS00:0xa8:       Mode: Release
23:06:03:WU01:FS00:0xa8:       SIMD: avx2_256
23:06:03:WU01:FS00:0xa8:     OpenMP: ON
23:06:03:WU01:FS00:0xa8:       CUDA: OFF
23:06:03:WU01:FS00:0xa8:       Args: -dir 01 -suffix 01 -version 706 -lifeline 447 -checkpoint 15 -np 6
23:06:03:WU01:FS00:0xa8:************************************ libFAH ************************************
23:06:03:WU01:FS00:0xa8:       Date: Jan 16 2021
23:06:03:WU01:FS00:0xa8:       Time: 19:21:38
23:06:03:WU01:FS00:0xa8:   Compiler: GNU 8.3.0
23:06:03:WU01:FS00:0xa8:    Options: -faligned-new -std=c++14 -fsigned-char -ffunction-sections
23:06:03:WU01:FS00:0xa8:             -fdata-sections -O3 -funroll-loops -fno-pie
23:06:03:WU01:FS00:0xa8:   Platform: linux2 4.15.0-128-generic
23:06:03:WU01:FS00:0xa8:       Bits: 64
23:06:03:WU01:FS00:0xa8:       Mode: Release
23:06:03:WU01:FS00:0xa8:************************************ CBang *************************************
23:06:03:WU01:FS00:0xa8:       Date: Jan 16 2021
23:06:03:WU01:FS00:0xa8:       Time: 19:21:24
23:06:03:WU01:FS00:0xa8:   Compiler: GNU 8.3.0
23:06:03:WU01:FS00:0xa8:    Options: -faligned-new -std=c++14 -fsigned-char -ffunction-sections
23:06:03:WU01:FS00:0xa8:             -fdata-sections -O3 -funroll-loops -fno-pie -fPIC
23:06:03:WU01:FS00:0xa8:   Platform: linux2 4.15.0-128-generic
23:06:03:WU01:FS00:0xa8:       Bits: 64
23:06:03:WU01:FS00:0xa8:       Mode: Release
23:06:03:WU01:FS00:0xa8:************************************ System ************************************
23:06:03:WU01:FS00:0xa8:        CPU: Intel(R) Core(TM) i5-8400 CPU @ 2.80GHz
23:06:03:WU01:FS00:0xa8:     CPU ID: GenuineIntel Family 6 Model 158 Stepping 10
23:06:03:WU01:FS00:0xa8:       CPUs: 6
23:06:03:WU01:FS00:0xa8:     Memory: 3.70GiB
23:06:03:WU01:FS00:0xa8:Free Memory: 3.43GiB
23:06:03:WU01:FS00:0xa8:    Threads: POSIX_THREADS
23:06:03:WU01:FS00:0xa8: OS Version: 5.19
23:06:03:WU01:FS00:0xa8:Has Battery: false
23:06:03:WU01:FS00:0xa8: On Battery: false
23:06:03:WU01:FS00:0xa8: UTC Offset: -8
23:06:03:WU01:FS00:0xa8:        PID: 451
23:06:03:WU01:FS00:0xa8:        CWD: /var/lib/private/fah/work
23:06:03:WU01:FS00:0xa8:********************************************************************************
23:06:03:WU01:FS00:0xa8:Project: 18435 (Run 29, Clone 11, Gen 0)
23:06:03:WU01:FS00:0xa8:Unit: 0x00000000000000000000000000000000
23:06:03:WU01:FS00:0xa8:Digital signatures verified
23:06:03:WU01:FS00:0xa8:Calling: mdrun -c frame0.gro -s frame0.tpr -x frame0.xtc -cpt 15 -nt 6 -ntmpi 1
23:06:03:WU01:FS00:0xa8:Steps: first=0 total=5000000
23:06:03:WU01:FS00:0xa8:Completed 1 out of 5000000 steps (0%)
23:06:09:WU01:FS00:FahCore returned: INTERRUPTED (102 = 0x66)
23:06:19:Removing old file 'configs/config-20220814-040709.xml'
23:06:19:Saving configuration to /etc/foldingathome/config.xml
23:06:19:<config>
23:06:19:  <!-- Folding Slot Configuration -->
23:06:19:  <cause v='PARKINSONS'/>
23:06:19:  <gpu v='false'/>

23:06:19:
23:06:19:  <!-- Folding Slots -->
23:06:19:  <slot id='0' type='CPU'/>
23:06:19:</config>

Re: 18435 stuck on Ready 0%

Posted: Sat Jan 14, 2023 12:02 am
by bikeaddict
This WU is failing for everyone, along with other adjacent Run/Clone numbers:

https://apps.foldingathome.org/wu#proje ... e=11&gen=0

To dump the bad WU, you can try stopping the FAHClient service, deleting the files in the work directory and restarting the service. Or you can delete and re-add the slot using FAHControl.
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