Code: Select all
[00:28:45] *------------------------------*
[00:28:45] Folding@Home Gromacs SMP Core
[00:28:45] Version 1.76 (February 23, 2008)
[00:28:45]
[00:28:45] Preparing to commence simulation
[00:28:45] - Ensuring status. Please wait.
[00:29:02] - Assembly optimizations manually forced on.
[00:29:02] - Not checking prior termination.
[00:29:13] - Expanded 4823847 -> 24810145 (decompressed 514.3 percent)
[00:29:13] - Starting from initial work packet
[00:29:14]
[00:29:14] Project: 2665 (Run 2, Clone 73, Gen 8)
[00:29:14]
[00:29:16] Assembly optimizations on if available.
[00:29:16] Entering M.D.
[00:29:23] Rejecting checkpoint
[00:29:25] Protein: HGG with glycosylations
[00:29:25] Writing local files
[00:29:32] Extra SSE boost OK.
[00:29:33] Writing local files
[00:29:33] Completed 0 out of 250000 steps (0 percent)
[00:44:35] Timered checkpoint triggered.
[...]
[05:12:43] Writing local files
[05:12:44] Completed 47500 out of 250000 steps (19 percent)
[05:15:18] Gromacs cannot continue further.
[05:15:18] Going to send back what have done.
[05:15:18] logfile size: 44969
[05:15:18] - Writing 45505 bytes of core data to disk...
[05:15:18] ... Done.
[05:15:18] - Failed to delete work/wudata_05.sas
[05:15:18] - Failed to delete work/wudata_05.goe
[05:15:18] Warning: check for stray files
[05:17:18]
[05:17:18] Folding@home Core Shutdown: EARLY_UNIT_END
[05:17:18]
[05:17:18] Folding@home Core Shutdown: EARLY_UNIT_END
[05:17:23] CoreStatus = 63 (99)
[05:17:23] + Error starting Folding@Home core or unexpected system termination of core.
[05:17:28]
[05:17:28] + Processing work unit
[05:17:28] Core required: FahCore_a1.exe
[05:17:28] Core found.
[05:17:28] Working on Unit 05 [June 5 05:17:28]
[05:17:28] + Working ...
[05:17:28] - Calling 'mpiexec -channel shm -env MPICH_USE_SMP_OPTIMIZATIONS 1 -np 4 FahCore_a1.exe -dir work/ -suffix 05 -checkpoint 15 -forceasm -verbose -lifeline 3032 -version 592'
[05:17:28]
[05:17:28] *------------------------------*
[05:17:28] Folding@Home Gromacs SMP Core
[05:17:28] Version 1.76 (February 23, 2008)
[05:17:28]
[05:17:28] Preparing to commence simulation
[05:17:28] - Assembly optimizations manually forced on.
[05:17:28] - Not checking prior termination.
[05:17:28]
[05:17:28] Folding@home Core Shutdown: MISSING_WORK_FILES
[05:17:28] Finalizing output
[05:19:46] NG_WORK_FILES
[05:19:46] Finalizing output
[05:19:50] CoreStatus = 1 (1)
[05:19:50] Client-core communications error: ERROR 0x1
[05:19:50] Deleting current work unit & continuing...
[05:22:10] - Warning: Could not delete all work unit files (5): Core returned invalid code
[...]
[05:22:36] + Closed connections
[05:22:41]
[05:22:41] + Processing work unit
[05:22:41] Core required: FahCore_a1.exe
[05:22:41] Core found.
[05:22:41] Working on Unit 06 [June 5 05:22:41]
[05:22:41] + Working ...
[05:22:41] - Calling 'mpiexec -channel shm -env MPICH_USE_SMP_OPTIMIZATIONS 1 -np 4 FahCore_a1.exe -dir work/ -suffix 06 -checkpoint 15 -forceasm -verbose -lifeline 3032 -version 592'
[05:22:41]
[05:22:41] *------------------------------*
[05:22:41] Folding@Home Gromacs SMP Core
[05:22:41] Version 1.76 (February 23, 2008)
[05:22:41]
[05:22:41] Preparing to commence simulation
[05:22:41] - Ensuring status. Please wait.
[05:22:58] - Assembly optimizations manually forced on.
[05:22:58] - Not checking prior termination.
[05:23:11] - Expanded 4823847 -> 24810145 (decompressed 514.3 percent)
[05:23:11] - Starting from initial work packet
[05:23:11]
[05:23:11] Project: 2665 (Run 2, Clone 73, Gen 8)
[05:23:11]
[05:23:11] ing from initial work packet
[05:23:11]
[05:23:11] Project: 2665 (Run 2, Clone 73, Gen 8)
[05:23:11]
[05:23:13] Assembly optimizations on if available.
[05:23:13] Entering M.D.
[05:23:21] les
[05:23:21] ein: HGG with glycosylations
[05:23:21] Writing local files
[05:23:21] Extra SSE boost OK.
[05:23:28] ps (0 percent)
[05:37:53] Writing local files
[05:37:53] Completed 2500 out of 250000 steps (1 percent)
[...]
[13:39:03] Writing local files
[13:39:03] Completed 80000 out of 250000 steps (32 percent)
no ... it's on one at 3.4 ...