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Graphical Viewer using Tracker V2 ?
Posted: Mon Sep 12, 2011 8:32 pm
by Gorisan
Another noob question: I am quite happy with FAH GPU Tracker V2. I am running a CPU client and a GPU client.
Anyhow, is there a Graphical interface or separate utility I can run to view graphically the unfolding of the Proteins?
I am running a MSI GTS 450 video card, if that helps at all.
Thanks you in advance for your time.
Gorisan_NCIX
Re: Graphical Viewer using Tracker V2 ?
Posted: Mon Sep 12, 2011 9:59 pm
by MtM
The gpu cores don't create the files needed to display the proteins in either jmol or the fah viewer. The cpu cores do though, and you could use the fah viewer ( available in the v7 client for instance ) or jmol.
Jmol is located here ->
http://jmol.sourceforge.net/index.en.html
Re: Graphical Viewer using Tracker V2 ?
Posted: Mon Sep 12, 2011 11:35 pm
by Jesse_V
MtM has mentioned v7, so I'd just like to expand upon it a bit. You'll notice from this page
https://fah-web.stanford.edu/projects/F ... /FahViewer that v7 has a nice 3D display. The v7 client is currently in beta testing and is not linked to from the download pages in folding.stanford.edu. It is the next generation client, and very much upcoming to be the norm. So basically users should have the ability to view their protein in action if they so desire. MtM pointed out that the GPU cores don't generate the files for the display in v7, and that's something new to me. I would speculate and hope that one day they will so everyone can view their protein if they so desire.
Re: Graphical Viewer using Tracker V2 ?
Posted: Tue Sep 13, 2011 4:47 am
by bruce
Jesse_V wrote:MtM pointed out that the GPU cores don't generate the files for the display in v7, and that's something new to me. I would speculate and hope that one day they will so everyone can view their protein if they so desire.
See
Ticket #409
Re: Graphical Viewer using Tracker V2 ?
Posted: Tue Sep 13, 2011 9:31 pm
by Gorisan
Thanks folks, I shall see take this information and proceed in a forward direction (hopefully)