Here's what it has logged so far since I started it today.
# Windows Console Edition #####################################################
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Folding@Home Client Version 5.04beta
http://folding.stanford.edu
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Launch directory: C:\Program Files\fah
Service: C:\Program Files\fah\fahconsole.exe
Arguments: -svcstart
Launched as a service.
Entered C:\Program Files\fah to do work.
[23:46:01] - Ask before connecting: No
[23:46:01] - Use IE connection settings: Yes
[23:46:01] - User name: ggganz (Team 47958)
[23:46:01] - User ID: 527141FF1B3C9AFF
[23:46:01] - Machine ID: 1
[23:46:01]
[23:46:01] Loaded queue successfully.
[23:46:01] + Benchmarking ...
[23:46:03]
[23:46:03] + Processing work unit
[23:46:03] Core required: FahCore_78.exe
[23:46:03] Core found.
[23:46:03] + Attempting to send results
[23:46:03] Working on Unit 05 [February 15 23:46:03]
[23:46:03] + Working ...
[23:46:04]
[23:46:04] *------------------------------*
[23:46:04] Folding@Home Gromacs Core
[23:46:04] Version 1.90 (March 8, 2006)
[23:46:04]
[23:46:04] Preparing to commence simulation
[23:46:04] - Looking at optimizations...
[23:46:04] - Files status OK
[23:46:04] - Expanded 398096 -> 2036561 (decompressed 511.5 percent)
[23:46:04]
[23:46:04] Project: 3405 (Run 5, Clone 663, Gen 26)
[23:46:04]
[23:46:04] Assembly optimizations on if available.
[23:46:04] Entering M.D.
[23:46:26] (Starting from checkpoint)
[23:46:26] Protein: p3405_dpdp-ii TIP3P ff03
[23:46:26]
[23:46:26] Writing local files
[23:46:26] Completed 560000 out of 4000000 steps (14)
[23:46:26] Extra SSE boost OK.
[23:46:42] Couldn't send HTTP request to server (wininet)
[23:46:42] + Could not connect to Work Server (results)
[23:46:42] (171.64.65.111:8080)
[23:46:42] - Error: Could not transmit unit 03 (completed February 9) to work server.
[23:46:42] + Attempting to send results
[23:47:14] Couldn't send HTTP request to server (wininet)
[23:47:14] + Could not connect to Work Server (results)
[23:47:14] (171.64.122.76:8080)
[23:47:14] Could not transmit unit 03 to Collection server; keeping in queue.
And after that it just starts writing whenever it finished 1% of the current WU. I have set my firewall to allow everything for that program. What do you think I should do?