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[08:42:49] Completed 495000 out of 500000 steps  (99 percent)
[08:53:32] Writing local files
[08:53:32] Completed 500000 out of 500000 steps  (100 percent)
[08:53:32] Writing final coordinates.
[08:53:33] Past main M.D. loop
[08:53:33] Will end MPI now
[08:54:33]
[08:54:33] Finished Work Unit:
[08:54:33] - Reading up to 3722208 from "work/wudata_03.arc": Read 3722208
[08:54:33] - Reading up to 1774896 from "work/wudata_03.xtc": Read 1774896
[08:54:33] goefile size: 0
[08:54:33] logfile size: 17314
[08:54:33] Leaving Run
[08:54:33] - Writing 5518818 bytes of core data to disk...
[08:54:33]   ... Done.
[08:54:33] - Failed to delete work/wudata_03.sas
[08:54:33] - Failed to delete work/wudata_03.goe
[08:54:33] Warning:  check for stray files
[08:54:33] - Shutting down core
[08:56:33]
[08:56:33] Folding@home Core Shutdown: FINISHED_UNIT
[08:56:33]
[08:56:33] Folding@home Core Shutdown: FINISHED_UNIT
[08:56:36] CoreStatus = 64 (100)
[08:56:36] Unit 3 finished with 79 percent of time to deadline remaining.
[08:56:36] Updated performance fraction: 0.797889
[08:56:36] Sending work to server
[08:56:36] Project: 2653 (Run 1, Clone 147, Gen 114)


[08:56:36] + Attempting to send results [June 16 08:56:36 UTC]
[08:56:36] - Reading file work/wuresults_03.dat from core
[08:56:36]   (Read 5518818 bytes from disk)
[08:56:36] Connecting to http://171.64.65.64:8080/
[08:57:06] Posted data.
[08:57:06] Initial: 0000; - Uploaded at ~179 kB/s
[08:57:06] - Averaged speed for that direction ~154 kB/s
[08:57:06] + Results successfully sent
[08:57:06] Thank you for your contribution to Folding@Home.
[08:57:06] + Number of Units Completed: 79

[08:57:10] - Warning: Could not delete all work unit files (3): Core returned in
valid code
[08:57:10] Trying to send all finished work units
[08:57:10] + No unsent completed units remaining.
[08:57:10] - Preparing to get new work unit...
[08:57:10] + Attempting to get work packet
[08:57:10] - Will indicate memory of 1024 MB
[08:57:10] - Connecting to assignment server
[08:57:10] Connecting to http://assign.stanford.edu:8080/
[08:57:11] Posted data.
[08:57:11] Initial: 40AB; - Successful: assigned to (171.64.65.64).
[08:57:11] + News From Folding@Home: Welcome to Folding@Home
[08:57:11] Loaded queue successfully.
[08:57:11] Connecting to http://171.64.65.64:8080/
[08:57:16] Posted data.
[08:57:16] Initial: 0000; - Receiving payload (expected size: 4725671)
[08:57:19] - Downloaded at ~1538 kB/s
[08:57:19] - Averaged speed for that direction ~1617 kB/s
[08:57:19] + Received work.
[08:57:19] Trying to send all finished work units
[08:57:19] + No unsent completed units remaining.
[08:57:19] + Closed connections
[08:57:19]
[08:57:19] + Processing work unit
[08:57:19] Work type a1 not eligible for variable processors
[08:57:19] Core required: FahCore_a1.exe
[08:57:19] Core found.
[08:57:19] Using generic mpiexec calls
[08:57:19] Working on queue slot 04 [June 16 08:57:19 UTC]
[08:57:19] + Working ...
[08:57:19] - Calling 'mpiexec -np 4 -channel auto -host 127.0.0.1 FahCore_a1.exe
 -dir work/ -suffix 04 -cpu 90 -checkpoint 30 -verbose -lifeline 2760 -version 6
23'

[08:57:19]
[08:57:19] *------------------------------*
[08:57:19] Folding@Home Gromacs SMP Core
[08:57:19] Version 1.74 (March 10, 2007)
[08:57:19]
[08:57:19] Preparing to commence simulation
[08:57:19] - Ensuring status. Please wait.
[08:57:22] - Starting from initial work packet
[08:57:23]
[08:57:23] Project: 2665 (Run 0, Clone 269, Gen 125)
[08:57:23]
[08:57:23] Assembly optimizations on if available.
[08:57:23] Entering M.D.
[08:57:41] l work pa- Starting from initial work packet
[08:57:41]
[08:57:41] Project: 2665 (Run 0, Clone 269, Gen 125)
[08:57:41]
[08:57:42] Entering M.D.
[08:58:04] Rejecting checkpoint
[08:58:06] Protein: HGG in water
[08:58:06] Writing local files
[08:58:10] Extra SSE boost OK.
[08:58:11] Writing local files
[08:58:11] Completed 0 out of 250000 steps  (0 percent)
[09:14:33] Writing local files
[09:14:33] Completed 2500 out of 250000 steps  (1 percent)
[09:31:06] Writing local files
[09:31:06] Completed 5000 out of 250000 steps  (2 percent)
[09:47:30] Writing local files
[09:47:30] Completed 7500 out of 250000 steps  (3 percent)
[10:04:05] Writing local files
[10:04:05] Completed 10000 out of 250000 steps  (4 percent)
[10:20:25] Writing local files
[10:20:25] Completed 12500 out of 250000 steps  (5 percent)
[10:37:03] Writing local files
[10:37:03] Completed 15000 out of 250000 steps  (6 percent)
[10:53:45] Writing local files
[10:53:45] Completed 17500 out of 250000 steps  (7 percent)
[11:10:27] Writing local files
[11:10:27] Completed 20000 out of 250000 steps  (8 percent)
[11:26:58] Writing local files
[11:26:58] Completed 22500 out of 250000 steps  (9 percent)
[11:43:31] Writing local files
[11:43:32] Completed 25000 out of 250000 steps  (10 percent)
[12:00:14] Writing local files
[12:00:15] Completed 27500 out of 250000 steps  (11 percent)
[12:16:54] Writing local files
[12:16:54] Completed 30000 out of 250000 steps  (12 percent)
[12:33:04] Writing local files
[12:33:04] Completed 32500 out of 250000 steps  (13 percent)
[12:39:09] - Autosending finished units... [June 16 12:39:09 UTC]
[12:39:09] Trying to send all finished work units
[12:39:09] + No unsent completed units remaining.
[12:39:09] - Autosend completed
[12:48:55] Writing local files
[12:48:55] Completed 35000 out of 250000 steps  (14 percent)
[13:04:41] Writing local files
[13:04:41] Completed 37500 out of 250000 steps  (15 percent)
[13:20:55] Writing local files
[13:20:55] Completed 40000 out of 250000 steps  (16 percent)
[13:37:36] Writing local files
[13:37:37] Completed 42500 out of 250000 steps  (17 percent)
[13:54:20] Writing local files
[13:54:20] Completed 45000 out of 250000 steps  (18 percent)
[14:10:57] Writing local files
[14:10:57] Completed 47500 out of 250000 steps  (19 percent)
[14:27:38] Writing local files
[14:27:38] Completed 50000 out of 250000 steps  (20 percent)
[14:44:19] Writing local files
[14:44:19] Completed 52500 out of 250000 steps  (21 percent)
[15:01:00] Writing local files
[15:01:01] Completed 55000 out of 250000 steps  (22 percent)
[15:17:41] Writing local files
[15:17:41] Completed 57500 out of 250000 steps  (23 percent)
[15:34:21] Writing local files
[15:34:22] Completed 60000 out of 250000 steps  (24 percent)
[15:47:10] Warning:  long 1-4 interactions
[15:47:10] Quit 101 - NaN detected: (ener[20])
[15:47:10]
[15:47:10] Simulation instability has been encountered. The run has entered a
[15:47:10]   state from which no further progress can be made.
[15:47:10] This may be the correct result of the simulation, however if you
[15:47:10]   often see other project units terminating early like this
[15:47:10]   too, you may wish to check the stability of your computer (issues
[15:47:10]   such as high temperature, overclocking, etc.).
[15:47:10] Going to send back what have done.
[15:47:10] logfile size: 0
[15:47:10] Warning: Core could not open logfile.
[15:47:10] - Writing 550 bytes of core data to disk...
[15:47:10]   ... Done.
[15:47:10] No C.P. to delete.
[15:49:10]
[15:49:10] Folding@home Core Shutdown: EARLY_UNIT_END
[15:49:10]
[15:49:10] Folding@home Core Shutdown: EARLY_UNIT_END
[15:49:13] CoreStatus = 7B (123)
[15:49:13] Sending work to server
[15:49:13] Project: 2665 (Run 0, Clone 269, Gen 125)


[15:49:13] + Attempting to send results [June 16 15:49:13 UTC]
[15:49:13] - Reading file work/wuresults_04.dat from core
[15:49:13]   (Read 54564 bytes from disk)
[15:49:13] Connecting to http://171.64.65.64:8080/
[15:49:14] Posted data.
[15:49:14] Initial: 0000; - Uploaded at ~54 kB/s
[15:49:14] - Averaged speed for that direction ~134 kB/s
[15:49:14] + Results successfully sent
[15:49:14] Thank you for your contribution to Folding@Home.
[15:49:18] - Warning: Could not delete all work unit files (4): Core returned in
valid code
[15:49:18] Trying to send all finished work units
[15:49:18] + No unsent completed units remaining.
[15:49:18] - Preparing to get new work unit...
[15:49:18] + Attempting to get work packet
[15:49:18] - Will indicate memory of 1024 MB
[15:49:18] - Connecting to assignment server
[15:49:18] Connecting to http://assign.stanford.edu:8080/
[15:49:18] Posted data.
[15:49:18] Initial: 40AB; - Successful: assigned to (171.64.65.64).
[15:49:18] + News From Folding@Home: Welcome to Folding@Home
[15:49:18] Loaded queue successfully.
[15:49:18] Connecting to http://171.64.65.64:8080/
[15:49:21] Posted data.
[15:49:21] Initial: 0000; - Receiving payload (expected size: 2427890)
[15:49:23] - Downloaded at ~1185 kB/s
[15:49:23] - Averaged speed for that direction ~1531 kB/s
[15:49:23] + Received work.
[15:49:23] Trying to send all finished work units
[15:49:23] + No unsent completed units remaining.
[15:49:23] + Closed connections
[15:49:28]
[15:49:28] + Processing work unit
[15:49:28] Work type a1 not eligible for variable processors
[15:49:28] Core required: FahCore_a1.exe
[15:49:28] Core found.
[15:49:28] Using generic mpiexec calls
[15:49:28] Working on queue slot 05 [June 16 15:49:28 UTC]
[15:49:28] + Working ...
[15:49:28] - Calling 'mpiexec -np 4 -channel auto -host 127.0.0.1 FahCore_a1.exe
 -dir work/ -suffix 05 -cpu 90 -checkpoint 30 -verbose -lifeline 2760 -version 6
23'

[15:49:28]
[15:49:28] *------------------------------*
[15:49:28] Folding@Home Gromacs SMP Core
[15:49:28] Version 1.74 (March 10, 2007)
[15:49:28]
[15:49:28] Preparing to commence simulation
[15:49:28] - Ensuring status. Please wait.
[15:49:29] - Starting from initial work packet
[15:49:29]
[15:49:29] Project: 2653 (Run 26, Clone 193, Gen 114)
[15:49:29]
[15:49:30] Assembly optimizations on if available.
[15:49:30] Entering M.D.
[15:49:47] ercent)
[15:49:47] - Starting from initial work packet
[15:49:47]
[15:49:47] Project: 2653 (Run 26, Clone 193, Gen 114)
[15:49:47]
[15:49:47] Entering M.D.
[15:50:06] Rejecting checkpoint
[15:50:07] SE boost OK.
[15:50:07] ein in POPC
[15:50:07] Writing local files
[15:50:07] Extra SSE boost OK.
[15:50:08] Writing local files
[15:50:08] Completed 0 out of 500000 steps  (0 percent)
[16:02:00] Writing local files
[16:02:01] Completed 5000 out of 500000 steps  (1 percent)
[16:14:11] Writing local files
[16:14:11] Completed 10000 out of 500000 steps  (2 percent)